Package: HDMAADMM 0.1.0

HDMAADMM: ADMM for High-Dimensional Mediation Models

We use the Alternating Direction Method of Multipliers (ADMM) for parameter estimation in high-dimensional, single-modality mediation models. To improve the sensitivity and specificity of estimated mediation effects, we offer the sure independence screening (SIS) function for dimension reduction. The available penalty options include Lasso, Elastic Net, Pathway Lasso, and Network-constrained Penalty. The methods employed in the package are based on Boyd, S., Parikh, N., Chu, E., Peleato, B., & Eckstein, J. (2011). <doi:10.1561/2200000016>, Fan, J., & Lv, J. (2008) <doi:10.1111/j.1467-9868.2008.00674.x>, Li, C., & Li, H. (2008) <doi:10.1093/bioinformatics/btn081>, Tibshirani, R. (1996) <doi:10.1111/j.2517-6161.1996.tb02080.x>, Zhao, Y., & Luo, X. (2022) <doi:10.4310/21-sii673>, and Zou, H., & Hastie, T. (2005) <doi:10.1111/j.1467-9868.2005.00503.x>.

Authors:Pei-Shan Yen [aut, cre], Ching-Chuan Chen [aut]

HDMAADMM_0.1.0.tar.gz
HDMAADMM_0.1.0.zip(r-4.5)HDMAADMM_0.1.0.zip(r-4.4)HDMAADMM_0.1.0.zip(r-4.3)
HDMAADMM_0.1.0.tgz(r-4.4-x86_64)HDMAADMM_0.1.0.tgz(r-4.4-arm64)HDMAADMM_0.1.0.tgz(r-4.3-x86_64)HDMAADMM_0.1.0.tgz(r-4.3-arm64)
HDMAADMM_0.1.0.tar.gz(r-4.5-noble)HDMAADMM_0.1.0.tar.gz(r-4.4-noble)
HDMAADMM_0.1.0.tgz(r-4.4-emscripten)HDMAADMM_0.1.0.tgz(r-4.3-emscripten)
HDMAADMM.pdf |HDMAADMM.html
HDMAADMM/json (API)

# Install 'HDMAADMM' in R:
install.packages('HDMAADMM', repos = c('https://psyen0824.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/psyen0824/hdmaadmm/issues

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

3.78 score 130 downloads 5 exports 5 dependencies

Last updated 3 months agofrom:5ab01e8924. Checks:OK: 1 ERROR: 8. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 01 2024
R-4.5-win-x86_64ERRORNov 01 2024
R-4.5-linux-x86_64ERRORNov 01 2024
R-4.4-win-x86_64ERRORNov 01 2024
R-4.4-mac-x86_64ERRORNov 01 2024
R-4.4-mac-aarch64ERRORNov 01 2024
R-4.3-win-x86_64ERRORNov 01 2024
R-4.3-mac-x86_64ERRORNov 01 2024
R-4.3-mac-aarch64ERRORNov 01 2024

Exports:cvSingleModalityAdmmgenerateLaplacianMatrixmodalityMediationDataGensingleModalityAdmmweightToLaplacian

Dependencies:BHdqrngRcppRcppEigensitmo