Package: HDMAADMM 0.1.0

HDMAADMM: ADMM for High-Dimensional Mediation Models

We use the Alternating Direction Method of Multipliers (ADMM) for parameter estimation in high-dimensional, single-modality mediation models. To improve the sensitivity and specificity of estimated mediation effects, we offer the sure independence screening (SIS) function for dimension reduction. The available penalty options include Lasso, Elastic Net, Pathway Lasso, and Network-constrained Penalty. The methods employed in the package are based on Boyd, S., Parikh, N., Chu, E., Peleato, B., & Eckstein, J. (2011). <doi:10.1561/2200000016>, Fan, J., & Lv, J. (2008) <doi:10.1111/j.1467-9868.2008.00674.x>, Li, C., & Li, H. (2008) <doi:10.1093/bioinformatics/btn081>, Tibshirani, R. (1996) <doi:10.1111/j.2517-6161.1996.tb02080.x>, Zhao, Y., & Luo, X. (2022) <doi:10.4310/21-sii673>, and Zou, H., & Hastie, T. (2005) <doi:10.1111/j.1467-9868.2005.00503.x>.

Authors:Pei-Shan Yen [aut, cre], Ching-Chuan Chen [aut]

HDMAADMM_0.1.0.tar.gz
HDMAADMM_0.1.0.zip(r-4.5)HDMAADMM_0.1.0.zip(r-4.4)HDMAADMM_0.1.0.zip(r-4.3)
HDMAADMM_0.1.0.tgz(r-4.5-x86_64)HDMAADMM_0.1.0.tgz(r-4.5-arm64)HDMAADMM_0.1.0.tgz(r-4.4-x86_64)HDMAADMM_0.1.0.tgz(r-4.4-arm64)HDMAADMM_0.1.0.tgz(r-4.3-x86_64)HDMAADMM_0.1.0.tgz(r-4.3-arm64)
HDMAADMM_0.1.0.tar.gz(r-4.5-noble)HDMAADMM_0.1.0.tar.gz(r-4.4-noble)
HDMAADMM_0.1.0.tgz(r-4.4-emscripten)HDMAADMM_0.1.0.tgz(r-4.3-emscripten)
HDMAADMM.pdf |HDMAADMM.html
HDMAADMM/json (API)

# Install 'HDMAADMM' in R:
install.packages('HDMAADMM', repos = c('https://psyen0824.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/psyen0824/hdmaadmm/issues

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

cpp

3.65 score 153 downloads 5 exports 5 dependencies

Last updated 6 months agofrom:5ab01e8924. Checks:1 OK, 10 ERROR. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 30 2025
R-4.5-win-x86_64ERRORJan 30 2025
R-4.5-mac-x86_64ERRORJan 30 2025
R-4.5-mac-aarch64ERRORJan 30 2025
R-4.5-linux-x86_64ERRORJan 30 2025
R-4.4-win-x86_64ERRORJan 30 2025
R-4.4-mac-x86_64ERRORJan 30 2025
R-4.4-mac-aarch64ERRORJan 30 2025
R-4.3-win-x86_64ERRORJan 30 2025
R-4.3-mac-x86_64ERRORJan 30 2025
R-4.3-mac-aarch64ERRORJan 30 2025

Exports:cvSingleModalityAdmmgenerateLaplacianMatrixmodalityMediationDataGensingleModalityAdmmweightToLaplacian

Dependencies:BHdqrngRcppRcppEigensitmo