Package: HDMAADMM 0.1.0

HDMAADMM: ADMM for High-Dimensional Mediation Models

We use the Alternating Direction Method of Multipliers (ADMM) for parameter estimation in high-dimensional, single-modality mediation models. To improve the sensitivity and specificity of estimated mediation effects, we offer the sure independence screening (SIS) function for dimension reduction. The available penalty options include Lasso, Elastic Net, Pathway Lasso, and Network-constrained Penalty. The methods employed in the package are based on Boyd, S., Parikh, N., Chu, E., Peleato, B., & Eckstein, J. (2011). <doi:10.1561/2200000016>, Fan, J., & Lv, J. (2008) <doi:10.1111/j.1467-9868.2008.00674.x>, Li, C., & Li, H. (2008) <doi:10.1093/bioinformatics/btn081>, Tibshirani, R. (1996) <doi:10.1111/j.2517-6161.1996.tb02080.x>, Zhao, Y., & Luo, X. (2022) <doi:10.4310/21-sii673>, and Zou, H., & Hastie, T. (2005) <doi:10.1111/j.1467-9868.2005.00503.x>.

Authors:Pei-Shan Yen [aut, cre], Ching-Chuan Chen [aut]

HDMAADMM_0.1.0.tar.gz
HDMAADMM_0.1.0.zip(r-4.7)HDMAADMM_0.1.0.zip(r-4.6)HDMAADMM_0.1.0.zip(r-4.5)
HDMAADMM_0.1.0.tgz(r-4.6-x86_64)HDMAADMM_0.1.0.tgz(r-4.6-arm64)HDMAADMM_0.1.0.tgz(r-4.5-x86_64)HDMAADMM_0.1.0.tgz(r-4.5-arm64)
HDMAADMM_0.1.0.tar.gz(r-4.7-arm64)HDMAADMM_0.1.0.tar.gz(r-4.7-x86_64)HDMAADMM_0.1.0.tar.gz(r-4.6-arm64)HDMAADMM_0.1.0.tar.gz(r-4.6-x86_64)
HDMAADMM_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
HDMAADMM/json (API)

# Install 'HDMAADMM' in R:
install.packages('HDMAADMM', repos = c('https://psyen0824.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/psyen0824/hdmaadmm/issues

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

cpp

2.70 score 183 downloads 5 exports 5 dependencies

Last updated from:5ab01e8924. Checks:11 ERROR, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64ERROR189
linux-devel-x86_64ERROR165
source / vignettesOK179
linux-release-arm64ERROR148
linux-release-x86_64ERROR152
macos-release-arm64ERROR156
macos-release-x86_64ERROR192
macos-oldrel-arm64ERROR128
macos-oldrel-x86_64ERROR212
windows-develERROR206
windows-releaseERROR156
windows-oldrelERROR154
wasm-releaseOK139

Exports:cvSingleModalityAdmmgenerateLaplacianMatrixmodalityMediationDataGensingleModalityAdmmweightToLaplacian

Dependencies:BHdqrngRcppRcppEigensitmo